TrapCLuster-Gene Report for TCLG1046

Internal Id  
1046
 
Accession  
TCLG1046
 
Sequence  
CTCAGGGTCCTGCCTTGGGACTACTATGGCTCCTGCTGAGGATATGGGGCTTAAGATAGTTGAGGGTTTTAAATACAATT
 
GCATAGGATTTTTaggatggagtgtaccaaatgatagttagaggctacatctgtgcagagttacgctgtgggacctgaga
 
agtggaagacccaggcgcacagttcggaaggtgtacacacagtgatgggcgttgtaaacagaaagtttggtggatcaagt
 
aagtctggcaccaaaaacatctacgtggtagctacacgtactgagtcaatgcttaagtctatggtttttcgaacttgcca
 
ttgagatggacagcttgtttcacaaactttttcttctctataatttactctaccaaagccatcaccaaattaaaccttta
 
gaaaaaaatatatcttggAGGTAGAGCCAGCCTACCACACTGTGGGGAGGCCCCGGATCAATAAGAATCACAGGTTAATG
 
AGGCAAGGAGACAAGATTTATCAACACTGTTTGCTGTAAGATACCTTCAAGACCTGCCTACACAAACACCTGCTTCTTCA
 
GCGCCTGCTCTGGGAGTGCCAAGTAAACAGGCCGTCCTTTAAGGTAGATGCATGGGAAAGACTCCCGTGGCCAGGAGAGC
 
TGGTCTCTCAGGAGCCACAGCAGAAAGCAGAGCCCTGAACTCATCGTTATTTAAACTTGTGAGCCTGTCTCTTTGCAGCC
 
AGACCTCTGCCCTCACTAATGGAAGGCATGCATTCTCCCGGGAAGGGCCAGTCCTCATTGGCGCTGATGTCTGAGGACAT
 
GAAGGGACAGACTGACAAGCTGGCCAAGTAAGGCCTGACTCCCTCCCAGACAGGTGTGATCCTGAGGGACTCCCACGGTG
 
TGGCACAGGTCTGTTTTGTGACTGGTAATAAAATCTTGAGATTCCTTCAGTCCAAAGGCCTCTACCATTTGATTAAGAAA
 
GCAGTCACTGTCTGAAAGCACCTTGAGAGGATCAGAAAGGAAAAGGATGCTAAATTCgccaaaaatgcaataaatgtcac
 
ggaacagatcttcataaagccattggtggatgaatcacggggtatctggaaaatgttttcttttcctttctagtgcaacg
 
gcctttttctctttaataaaaaacaacaaa
 
RNA length  
1150
 
Type  
antisense
 
Overlapping 
 
Novel only  
1
 
RT-PCR confirmed  
1
 
LORF Length  
60
 
LORF-Blastp Result  
0
 
Go To Ensembl 
Go To UCSC 

Internal Id  Chromosome  Start  End  Strand  Mouse Release  
2238
 		 
16
 		 
93099598
 		 
93208570
 		 
1
 		 
NCBIM34
 



Longest ORF Translation Length Strand 
ATGGGAAAGACTCCCGTGGCCAGGAGAGCTGGTCTCTCAGGAGCCACAGC
AGAAAGCAGAGCCCTGAACTCATCGTTATTTAAACTTGTGAGCCTGTCTC
TTTGCAGCCAGACCTCTGCCCTCACTAATGGAAGGCATGCATTCTCCCGG
GAAGGGCCAGTCCTCATTGGCGCTGATGTCT
 
MGKTPVARRAGLSGATAESRALNSSLFKLVSLSLCSQTSALTNGRHAFSR
EGPVLIGADV
 
60
 
+

BLASTP Hit ID (ORF) Description Score Start End Frac Aligned Query Num Hsps Frac Identical Length   
No BLASTP result for Longest-ORF!

TrapCLuster TCL11045
Public Clones  
Private Clones OST125462 (lexicon)
 
TrapCLuster TCL11046
Public Clones  
Private Clones OST102080 (lexicon)
 
TrapCLuster TCL11047
Public Clones  
Private Clones OST136132 (lexicon) OST58310 (lexicon) OST307042 (lexicon)
OST295374 (lexicon) OST452509 (lexicon) OST251488 (lexicon)
OST195959 (lexicon) OST412344 (lexicon) OST302599 (lexicon)
OST383669 (lexicon) OST167663 (lexicon) OST128466 (lexicon)
OST299263 (lexicon)
 
TrapCLuster TCL11048
Public Clones  
Private Clones OST14412 (lexicon) OST96557 (lexicon)