TrapCLuster-Gene Report for TCLG1647

Internal Id 
1647
 
Accession 
TCLG1647
 
Sequence 
TTCATATGAGACCATGAAGCCTGGCAAGGACTCGAACCAGCGAATCCAGCCTCTGAGGACTGTTTTTTCCGCTTTAAGAA
CCTACCTCGcatcaacaacgctgagaagagaggcaaacgccaggtcctcatcaggccatgttctaagtcatcgttcggtt
cttaaccgtgatgatgaagcacggatacattggtgaattcgagatcattgatgatcacagagctgggaagattgttgtga
acctcacaggaaggttgaacaagtgtggcgttataagccctagatttgatgttcaactcaaagacctagagaaatggcag
aacaacctgctcccttcacgtcagtttggcttcattgtgctgacaacctcggctggcattatggaccatgaagaggcaag
acgaaaacatagaggagggaaaatcctgggattctttttttaaatgtaaagcataaataaaaagcctttgtggactgtgC
AAGAAATGCATTGCTTTGCTGAATTCTATTGCAAAGAAAACGACCATTTAGAAAACAGAGGATGCAGGGTTGTGTTTGGA
CACCACACAAGGTGATGCACTGCTGTGCTCTGACACCACTGCAAGGGGggctcatgggtcatctcttccaatccagtgca
gctccctgaaggaagaccagaggatactttcaacaccctggtgtctttggcttaacaaatggtgagctgactaaagtAGG
CTGTATTTGTGAGGCACAGCAAGGCTCAGAGAGGGCAGACACCCACCCTGGATCACACAGAAGTGGgcagatggtgcatt
gtcaagacggggaattcgtgacagcatgctaggctggagcctggcactctggggacaataatgagcacattaatgaatga
agaggctgcaaagcccaacctgcatggttgctgtggtggttaattttgaccatcagctcgattTACCCAAACTGGAAGGT
ATGAGTCCTGGTTGACCTGCTAATGTGCTTTCTCTCCCTAGTCTCTTTTTGGTCCCAAGAATCAATCCAGCACCA
 
RNA length 
1035
 
Type 
antisense
 
Overlapping 
 
 
Novel only 
1
 
RT-PCR confirmed 
1
 
LORF Length 
90
 
LORF-Blastp Result 
1
 
Go To Ensembl 
Go To UCSC 

Internal Id  Chromosome  Start  End  Strand  Mouse Release 
2220
 
2
 
151568093
 
151646319
 
-1
 
NCBIM34
 



Longest ORF Translation Length Strand
atgatgaagcacggatacattggtgaattcgagatcattgatgatcacag
agctgggaagattgttgtgaacctcacaggaaggttgaacaagtgtggcg
ttataagccctagatttgatgttcaactcaaagacctagagaaatggcag
aacaacctgctcccttcacgtcagtttggcttcattgtgctgacaacctc
ggctggcattatggaccatgaagaggcaagacgaaaacatagaggaggga
aaatcctgggattcttttttt
MMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQ
NNLLPSRQFGFIVLTTSAGIMDHEEARRKHRGGKILGFFF
90
+

BLASTP Hit ID (ORF) Description Score Start End Frac Aligned Query Num Hsps Frac Identical Length  
UniRef90_P62244
40S ribosomal protein S15a related cluster
186
1
90
1
1
0.989
129
view hsps
UniRef90_UPI0000493DDD
Cluster related to UPI0000493DDD; PREDICTED: simil
ar to Rps15a protein
186
1
90
1
1
0.989
151
view hsps
UniRef90_UPI00004F04A1
Cluster related to UPI00004F04A1; PREDICTED: simil
ar to FLJ16636 protein, partial
186
1
90
1
1
0.989
683
view hsps
UniRef90_Q90YQ8
40S ribosomal protein S15a related cluster
183
1
90
1
1
0.978
129
view hsps
UniRef90_UPI00004A5DA0
Cluster related to UPI00004A5DA0; PREDICTED: simil
ar to ribosomal protein S15a
182
1
89
0.99
1
0.966
138
view hsps
UniRef90_UPI00004A5BB6
Cluster related to UPI00004A5BB6; PREDICTED: hypot
hetical protein XP_532791
179
1
90
1
1
0.956
131
view hsps
UniRef90_UPI000049074A
Cluster related to UPI000049074A; PREDICTED: simil
ar to Rps15a protein
179
1
90
1
1
0.956
149
view hsps
UniRef90_UPI00004A3F87
Cluster related to UPI00004A3F87; PREDICTED: simil
ar to Rps15a protein
176
1
90
1
1
0.944
283
view hsps
UniRef90_UPI00004EEBC0
Cluster related to UPI00004EEBC0; PREDICTED: simil
ar to Rps15a protein, partial
174
1
90
1
1
0.933
149
view hsps
UniRef90_UPI00004F0FDD
Cluster related to UPI00004F0FDD; PREDICTED: simil
ar to Rps15a protein
173
1
90
1
1
0.933
147
view hsps
UniRef90_P48149
40S ribosomal protein S15Aa related cluster
172
1
90
1
1
0.878
129
view hsps
UniRef90_Q7KR04
40S ribosomal protein S15Ab related cluster
171
1
90
1
1
0.867
129
view hsps
UniRef90_UPI0000512075
Cluster related to UPI0000512075; PREDICTED: simil
ar to Rps15a protein
170
1
90
1
1
0.911
294
view hsps
UniRef90_UPI00004A5462
Cluster related to UPI00004A5462; PREDICTED: simil
ar to Rps15a protein
168
1
90
1
1
0.911
233
view hsps
UniRef90_UPI00004918FB
Cluster related to UPI00004918FB; PREDICTED: simil
ar to ribosomal protein S15a
167
1
90
1
1
0.889
144
view hsps
UniRef90_Q5QBH8
Ribosomal protein S15 related cluster
166
1
90
1
1
0.844
130
view hsps
UniRef90_P50891
40S ribosomal protein S15a related cluster
166
1
90
1
1
0.822
129
view hsps
UniRef90_UPI000056662C
Cluster related to UPI000056662C; PREDICTED: simil
ar to ribosomal protein S15a
166
1
90
1
1
0.867
130
view hsps
UniRef90_Q7PMI3
ENSANGP00000021108 related cluster
165
1
90
1
1
0.822
130
view hsps
UniRef90_Q8T5T2
Ribosomal protein S24 related cluster
165
1
90
1
1
0.844
130
view hsps
UniRef90_UPI00001CB74E
Cluster related to UPI00001CB74E; similar to Rps15
a protein
164
1
90
1
1
0.867
127
view hsps
UniRef90_Q8I7X5
Ribosomal protein S15a related cluster
164
1
90
1
1
0.833
130
view hsps
UniRef90_UPI000013E925
Cluster related to UPI000013E925
162
1
90
1
1
0.867
129
view hsps
UniRef90_UPI000050158B
Cluster related to UPI000050158B; similar to 40S r
ibosomal protein S15a
160
3
89
0.97
1
0.874
130
view hsps
UniRef90_O17218
Ribosomal protein, small subunit protein 22 relate
d cluster
160
1
90
1
1
0.833
130
view hsps
UniRef90_Q5MGL9
Ribosomal protein S8 related cluster
159
1
87
0.97
1
0.862
131
view hsps
UniRef90_Q4KTC6
S15a related cluster
157
1
90
1
1
0.8
130
view hsps
UniRef90_UPI00004F266F
Cluster related to UPI00004F266F; PREDICTED: simil
ar to ribosomal protein S15a, partial
157
1
89
0.99
1
0.843
108
view hsps
UniRef90_UPI0000514D9B
Cluster related to UPI0000514D9B
156
5
90
0.96
1
0.849
107
view hsps
UniRef90_UPI0000494AC2
Cluster related to UPI0000494AC2; PREDICTED: simil
ar to ribosomal protein S15a
156
1
90
1
1
0.844
143
view hsps
UniRef90_UPI00004926A9
Cluster related to UPI00004926A9; PREDICTED: simil
ar to FKSG89
155
1
77
0.86
1
0.974
614
view hsps
UniRef90_Q5DH03
Hypothetical protein related cluster
154
1
90
1
1
0.778
130
view hsps
UniRef90_P04648
40S ribosomal protein S22 related cluster
153
1
90
1
1
0.778
129
view hsps
UniRef90_P42798
40S ribosomal protein S15a related cluster
153
1
90
1
1
0.789
129
view hsps
UniRef90_Q4N673
40S ribosomal protein S15a, putative related clust
er
153
1
90
1
1
0.744
130
view hsps
UniRef90_Q4QGW3
40S ribosomal protein S15a, putative related clust
er
153
1
90
1
1
0.778
130
view hsps
UniRef90_Q6C0E7
Yarrowia lipolytica chromosome F of strain CLIB99 
of Yarrowia lipolytica related cluster
152
1
90
1
1
0.767
130
view hsps
UniRef90_UPI0000490A5E
Cluster related to UPI0000490A5E; PREDICTED: simil
ar to ribosomal protein S15a
151
1
90
1
1
0.811
307
view hsps
UniRef90_Q4WRN1
Ribosomal protein S8 related cluster
150
1
90
1
1
0.756
130
view hsps
UniRef90_Q7RV75
40S ribosomal protein S22 related cluster
149
1
90
1
1
0.744
130
view hsps
UniRef90_Q4PG96
Hypothetical protein related cluster
148
1
90
1
1
0.733
130
view hsps
UniRef90_UPI00004A7868
Cluster related to UPI00004A7868; PREDICTED: simil
ar to Rps15a protein
147
1
90
1
1
0.822
141
view hsps
UniRef90_Q6XZG0
Ribosomal S15a protein related cluster
145
1
90
1
1
0.722
130
view hsps
UniRef90_O80646
40S ribosomal protein S15A related cluster
145
1
90
1
1
0.733
136
view hsps
UniRef90_P46793
40S ribosomal protein S15a related cluster
145
1
90
1
1
0.733
129
view hsps
UniRef90_Q6CW06
Kluyveromyces lactis strain NRRL Y-1140 chromosome
B of strain NRRL Y- 1140 of Kluyveromyces lactis
related cluster
144
5
90
0.96
1
0.767
104
view hsps
UniRef90_Q9UUP9
Ribosomal protein 22 of the small subunit related 
cluster
143
1
90
1
1
0.722
130
view hsps
UniRef90_UPI00004949BA
Cluster related to UPI00004949BA; PREDICTED: simil
ar to ribosomal protein S15a
142
1
90
1
1
0.822
112
view hsps
UniRef90_O14469
40S ribosomal protein S22 related cluster
142
1
90
1
1
0.744
130
view hsps
UniRef90_Q5CVE5
40S ribosomal protein S15A , transcript identified
by EST related cluster
141
1
90
1
1
0.733
137
view hsps
UniRef90_O77395
40S ribosomal protein S15A, putative related clust
er
139
1
90
1
1
0.711
130
view hsps
UniRef90_Q5K979
Ribosomal protein 22 of the small subunit, putativ
e related cluster
138
1
90
1
1
0.711
130
view hsps
UniRef90_UPI0000511B45
Cluster related to UPI0000511B45; PREDICTED: simil
ar to Rps15a protein
137
1
66
0.73
1
0.985
162
view hsps
UniRef90_UPI00004A7513
Cluster related to UPI00004A7513; PREDICTED: simil
ar to Rps15a protein
137
1
90
1
1
0.767
402
view hsps
UniRef90_UPI0000493FE2
Cluster related to UPI0000493FE2; PREDICTED: hypot
hetical protein XP_523505
135
1
90
1
1
0.756
129
view hsps
UniRef90_P46792
40S ribosomal protein S22 related cluster
135
1
90
1
1
0.711
130
view hsps
UniRef90_Q76KS7
Ribosomal protein S15a related cluster
133
1
90
1
1
0.689
130
view hsps
UniRef90_Q4HWY1
Hypothetical protein related cluster
133
1
90
1
1
0.711
130
view hsps
UniRef90_Q515N0
40S ribosomal protein S15a, putative related clust
er
132
1
90
1
1
0.667
130
view hsps
UniRef90_UPI00004A492E
Cluster related to UPI00004A492E; PREDICTED: simil
ar to Hypothetical protein HSPC111
129
1
63
0.7
1
0.968
441
view hsps
UniRef90_Q76KS2
Ribosomal protein S15a related cluster
126
1
90
1
1
0.622
130
view hsps
UniRef90_Q9AVX4
40S ribosomal protein S15A related cluster
123
1
90
1
1
0.622
130
view hsps
UniRef90_UPI00005042E3
Cluster related to UPI00005042E3
123
1
90
1
1
0.7
120
view hsps
UniRef90_UPI00004D3DA5
Cluster related to UPI00004D3DA5
122
30
90
0.68
1
0.934
130
view hsps
UniRef90_UPI00004EE93A
Cluster related to UPI00004EE93A; PREDICTED: simil
ar to ribosomal protein S15a
122
1
77
0.86
1
0.818
107
view hsps
UniRef90_UPI00004EF2D0
Cluster related to UPI00004EF2D0; PREDICTED: simil
ar to ribosomal protein S15a, partial
117
28
90
0.7
1
0.889
98
view hsps
UniRef90_Q9V1V0
30S ribosomal protein S8P related cluster
103
1
90
1
1
0.489
130
view hsps
UniRef90_Q8SQL9
40S RIBOSOMAL PROTEIN S15A related cluster
102
1
90
1
1
0.489
128
view hsps
UniRef90_Q6EN44
Putative 40S ribosomal protein S15A related cluste
r
99
1
89
0.99
1
0.483
129
view hsps
UniRef90_O26126
30S ribosomal protein S8P related cluster
99
1
90
1
1
0.478
133
view hsps
UniRef90_Q8TW15
30S ribosomal protein S8P related cluster
99
1
90
1
1
0.467
130
view hsps
UniRef90_Q977V0
30S ribosomal protein S8P related cluster
99
1
90
1
1
0.478
130
view hsps
UniRef90_P54041
30S ribosomal protein S8P related cluster
98
1
90
1
1
0.467
130
view hsps
UniRef90_Q975J5
30S ribosomal protein S8P related cluster
97
1
90
1
1
0.5
133
view hsps
UniRef90_Q8TRT2
30S ribosomal protein S8P related cluster
96
1
90
1
1
0.467
130
view hsps
UniRef90_Q673R3
Ribosomal protein S8 related cluster
96
1
90
1
1
0.422
129
view hsps
UniRef90_Q64BF2
SSU ribosomal protein S8P related cluster
95
1
90
1
1
0.456
130
view hsps
UniRef90_O82205
40S ribosomal protein S15A related cluster
93
1
89
0.99
1
0.461
129
view hsps
UniRef90_Q977U8
30S ribosomal protein S8P related cluster
93
1
90
1
1
0.422
130
view hsps
UniRef90_O05636
30S ribosomal protein S8P related cluster
92
1
90
1
1
0.5
133
view hsps
UniRef90_Q9UX92
30S ribosomal protein S8P related cluster
92
1
90
1
1
0.5
133
view hsps
UniRef90_Q8ZVW0
30S ribosomal protein S8P related cluster
91
1
90
1
1
0.389
130
view hsps
UniRef90_Q6LXD8
30S ribosomal protein S8P related cluster
89
1
90
1
1
0.411
130
view hsps
UniRef90_Q6L1B2
Small subunit ribosomal protein S8P related cluste
r
89
1
90
1
1
0.433
129
view hsps
UniRef90_UPI00004192D5
Cluster related to UPI00004192D5; PREDICTED: simil
ar to Rps15a protein
89
48
90
0.48
1
0.953
202
view hsps
UniRef90_O28369
30S ribosomal protein S8P related cluster
87
1
90
1
1
0.378
131
view hsps
UniRef90_Q9HIS2
30S ribosomal protein S8P related cluster
87
1
90
1
1
0.433
129
view hsps
UniRef90_P12742
30S ribosomal protein S8P related cluster
87
5
90
0.96
1
0.419
129
view hsps
UniRef90_Q9HPB9
30S ribosomal protein S8P related cluster
86
5
90
0.96
1
0.419
130
view hsps
UniRef90_UPI000054218A
Cluster related to UPI000054218A; Ribosomal protei
n S8
84
1
90
1
1
0.411
129
view hsps
UniRef90_UPI00004A420B
Cluster related to UPI00004A420B; PREDICTED: simil
ar to RIKEN cDNA 2610033H07
79
2
42
0.46
1
0.878
1196
view hsps
UniRef90_Q9YF89
30S ribosomal protein S8P related cluster
77
3
90
0.98
1
0.443
135
view hsps
UniRef90_UPI000041AA97
Cluster related to UPI000041AA97; PREDICTED: simil
ar to ribosomal protein S15 isoform
77
1
40
0.44
1
0.85
323
view hsps
UniRef90_UPI00004F3C40
Cluster related to UPI00004F3C40; PREDICTED: simil
ar to ribosomal protein S15a, partial
71
1
90
1
1
0.467
96
view hsps
UniRef90_Q74NG1
NEQ274 related cluster
68
1
90
1
1
0.322
129
view hsps
UniRef90_UPI00004BEC66
Cluster related to UPI00004BEC66
66
1
40
0.44
1
0.775
79
view hsps
UniRef90_UPI0000507EC3
Cluster related to UPI0000507EC3; PREDICTED: simil
ar to ribosomal protein L21
53
8
81
0.82
1
0.432
237
view hsps

TrapCLuster TCL17346
Public Clones  
Private Clones OST221210 (lexicon)
 
TrapCLuster TCL17347
Public Clones  
Private Clones OST77751 (lexicon) OST46007 (lexicon)
 
TrapCLuster TCL17348
Public Clones  
Private Clones OST340899 (lexicon) OST271157 (lexicon) OST281004 (lexicon)
 
TrapCLuster TCL17349
Public Clones  
Private Clones OST216379 (lexicon)
 
TrapCLuster TCL17350
Public Clones  
Private Clones OST251040 (lexicon)