TrapCLuster-Gene Report for TCLG2005

Internal Id

Accession

TCLG2005

Sequence

CCAGATCCTGCCACAGAATGGGCTCCAAGGAGCAGAGGATGAGTAGATGAGCCGGAGCGCCGCTACCCAGTGCCTATTAA

AGCTGCTCGCTGCCCTGTCGGTGAGTGAGCGTTGTCACTGTCTTCTCTGCTTAAGCCTGCTGCTGACAGCGTGGCTCCCT

CTACCAATTCTCCCTCCCTGCCACTCTACTCTCTGCATCCTCCAACCTTTCTCTCTCACAGGATTTTAACTAGTCCTTGG

CACCAGAGGGTGGTTGCTCTACATGAGGCACTTGTCTGTTATCCTAACTAAAGCATTACCGCAGATCACTTTAGTCCAAG

CCACCATCAgatcaattatcctgcccatctttaaagaagccatccagtaagggttccaagccccaggaagAGATCCAACA

ATGACGCCGAGGGAGAAACAGTGGCAAGAATATAGAAAGGGGCCTTTTCTTGCGCCCCTCAACCTTCCTTAGTCTATGAA

GTTCTGCCTTTCCTACTGCCCACATCCAGctaactgttgtttttcaattcattaccgtgagccctctgtgggtatgagaa

actagccagatacatgcatgtgta

RNA length

Type

antisense

Overlapping

Novel only

RT-PCR confirmed

LORF Length

LORF-Blastp Result

Go To Ensembl

Go To UCSC

Internal Id	Chromosome	Start	End	Strand	Mouse Release
226	4	132002562	132030357	-1	NCBIM34

Longest ORF

Translation

Length

Strand

ATGAGCCGGAGCGCCGCTACCCAGTGCCTATTAAAGCTGCTCGCTGCCCT
GTCGGTGAGTGAGCGTTGTCACTGTCTTCTCTGCTTAAGCCTGCTGCTGA
CAGCGTGGCTCCCTCTACCAATTCTCCCTCCCTGCCACTCTACTCTCTGC
ATCCTCCAACCTTTCTCTCTCACAGGATTTT

MSRSAATQCLLKLLAALSVSERCHCLLCLSLLLTAWLPLPILPPCHSTLC
ILQPFSLTGF

BLASTP Hit ID (ORF)	Description	Score	Start	End	Frac Aligned Query	Num Hsps	Frac Identical	Length
No BLASTP result for Longest-ORF!

TrapCLuster	TCL20963
Public Clones
Private Clones	OST99095 (lexicon) OST15348 (lexicon)

TrapCLuster	TCL20964
Public Clones	CMHD-GT_140B8-3 (cmhd)
Private Clones	OST66198 (lexicon) OST271998 (lexicon) OST453691 (lexicon) OST66166 (lexicon) OST334453 (lexicon) OST192399 (lexicon) OST282324 (lexicon) OST284472 (lexicon) OST437951 (lexicon) OST64628 (lexicon) OST445297 (lexicon) OST395488 (lexicon) OST54693 (lexicon) OST63870 (lexicon) OST372219 (lexicon) OST48527 (lexicon) OST107291 (lexicon) OST198123 (lexicon) OST67766 (lexicon) OST394944 (lexicon) OST434528 (lexicon) OST262776 (lexicon) OST451078 (lexicon) OST78719 (lexicon) OST47156 (lexicon) OST267333 (lexicon) OST409530 (lexicon) OST352942 (lexicon) OST85905 (lexicon) OST77348 (lexicon) OST266891 (lexicon) OST347908 (lexicon) OST67983 (lexicon) OST41893 (lexicon) OST464217 (lexicon) OST40989 (lexicon) OST355837 (lexicon) OST252904 (lexicon) OST40453 (lexicon) OST427145 (lexicon) OST139579 (lexicon) OST79812 (lexicon) OST428835 (lexicon) OST301347 (lexicon) OST442952 (lexicon) OST419732 (lexicon) OST269761 (lexicon) OST416670 (lexicon) OST390239 (lexicon) OST260973 (lexicon) OST425598 (lexicon) OST448245 (lexicon) OST267623 (lexicon) OST102417 (lexicon) OST65342 (lexicon) OST338661 (lexicon) OST389669 (lexicon)