TrapCLuster-Gene Report for TCLG2033

Internal Id

Accession

TCLG2033

Sequence

ACAGAAAAACCAGGAGCTGGAAGCAATCCCCCTGCCCCACAGATTGCCCCCATGTCCGCTTCTGAAGGGACCAAGAACCA

CAGACCTCCTCTTCAGAGGCCTGCTGCCTGGACACCCGTGTGGCATCCGCCCTGAGCTGGAGGTGCAAAGCCAAGATGAT

TTAATTTATAGAAAGGACAAAGATGTCGTGTAGCAGATTTAATCATCGGAGAGTTTagggaggagagataattcttcaat

gtgggacacatctgggagccaaggaggcagaggctgaggggagaaacgcgaaattatatatggtcataaaaaatacaaaa

ATCAGCCGGGCAGGGTCTTCCAGGACATACAGAAACTGGGCGGTCTGAGTCTCCATGGGACAAGGTCAGAGGTTCTCTcc

tgcggactctgtggcggacggtggcttcgttccacgttgcactccacctgaatatgtactcggggcaggagatgggtgct

gggcagggaggacatgggacacctgtgatggcggtgacctggaacagcccaccgtcccctctctgtcagccagagctgct

gctttctccttctgctagccgaggctggtgttttatgaaccccgaaccgcagcaagattctcctattaatttattggtat

tgctaattaaacatcatattcgcaaatgtaaaAGGTCACTTGAAGTGTTTCCTCCACTCCAGCCTCTTCAACCAAGCGTC

TCTCGGTCTTaggtctggtgtttcacctgtgactggatgtctgtgttgttcccatctccggactctagtgcacactgctg

ctaccagggggtgagggtggggggaagtgccacgttttgggcagaggaagggataaatgctagtgaatagctggcaagca

gca

RNA length

Type

gene

Overlapping

Novel only

RT-PCR confirmed

LORF Length

LORF-Blastp Result

Go To Ensembl

Go To UCSC

Internal Id	Chromosome	Start	End	Strand	Mouse Release
1604	4	147226815	147237568	-1	NCBIM34

Longest ORF

Translation

Length

Strand

atgtactcggggcaggagatgggtgctgggcagggaggacatgggacacc
tgtgatggcggtgacctggaacagcccaccgtcccctctctgtcagccag
agctgctgctttctccttctgctagccgaggctggtgttttatgaacccc
gaaccgcagcaagattctcctattaatttattggtattgctaattaaaca
tcatattcgcaaatgtaaaAGGTCACTTGAAGTGTTTCCTCCACTCCAGC
CTCTTCAACCAAGCGTCTCTCGGTCTT

MYSGQEMGAGQGGHGTPVMAVTWNSPPSPLCQPELLLSPSASRGWCFMNP
EPQQDSPINLLVLLIKHHIRKCKRSLEVFPPLQPLQPSVSRS

BLASTP Hit ID (ORF)	Description	Score	Start	End	Frac Aligned Query	Num Hsps	Frac Identical	Length
No BLASTP result for Longest-ORF!

TrapCLuster	TCL21253
Public Clones
Private Clones	OST127726 (lexicon) OST353325 (lexicon) OST351676 (lexicon)

TrapCLuster	TCL21254
Public Clones
Private Clones	OST52232 (lexicon) OST384283 (lexicon)

TrapCLuster	TCL21255
Public Clones	M047A02 (ggtc)
Private Clones

TrapCLuster	TCL21256
Public Clones
Private Clones	OST88675 (lexicon) OST310765 (lexicon) OST385058 (lexicon) OST320453 (lexicon) OST287683 (lexicon) OST154504 (lexicon) OST308921 (lexicon) OST33450 (lexicon) OST155965 (lexicon) OST301724 (lexicon) OST49958 (lexicon) OST429912 (lexicon) OST126542 (lexicon) OST76539 (lexicon) OST310483 (lexicon) OST425229 (lexicon) OST192087 (lexicon) OST403158 (lexicon) OST329187 (lexicon) OST442063 (lexicon) OST38820 (lexicon) OST64457 (lexicon) OST275682 (lexicon) OST156060 (lexicon) OST275617 (lexicon) OST370104 (lexicon) OST265991 (lexicon) OST330424 (lexicon) OST428625 (lexicon) OST79885 (lexicon) OST112149 (lexicon) OST232363 (lexicon) OST384295 (lexicon) OST305358 (lexicon) OST312211 (lexicon) OST414319 (lexicon) OST95880 (lexicon) OST76211 (lexicon)