TrapCLuster-Gene Report for TCLG2486

Internal Id 
2486
 
Accession 
TCLG2486
 
Sequence 
GGTGTATGATGAAAAAGACTACAGGAGGATTCGTTTTGTAGATCGTCAGAAAGAGGTGAATGAGAACTTTGCCATTGATT
TGATAGCACAACAGCCTGTGAATGAGGTGGACCATCGTATCATAGCCTGCGATGGAGGCGGTGGTGCCCTGGGCCACCCT
AAGGTGTACATAAACTTGGACAAAGAAACAAAAAgaatgtcagcgggacatccctgagcagcaccgcagcgcagatgtgc
acagatgaggcaggaggacggcaggtggagtaagctctctgatgatgtcactcataagagcaagccacgagcca
 
RNA length 
314
 
Type 
antisense
 
Overlapping 
 
 
Novel only 
1
 
RT-PCR confirmed 
1
 
LORF Length 
71
 
LORF-Blastp Result 
1
 
Go To Ensembl 
Go To UCSC 

Internal Id  Chromosome  Start  End  Strand  Mouse Release 
4162
 
7
 
74894516
 
74968289
 
-1
 
NCBIM34
 



Longest ORF Translation Length Strand
GTGTATGATGAAAAAGACTACAGGAGGATTCGTTTTGTAGATCGTCAGAA
AGAGGTGAATGAGAACTTTGCCATTGATTTGATAGCACAACAGCCTGTGA
ATGAGGTGGACCATCGTATCATAGCCTGCGATGGAGGCGGTGGTGCCCTG
GGCCACCCTAAGGTGTACATAAACTTGGACAAAGAAACAAAAAgaatgtc
agcgggacatccct
VYDEKDYRRIRFVDRQKEVNENFAIDLIAQQPVNEVDHRIIACDGGGGAL
GHPKVYINLDKETKRMSAGHP
71
+

BLASTP Hit ID (ORF) Description Score Start End Frac Aligned Query Num Hsps Frac Identical Length  
UniRef90_Q5M9J7
NADH dehydrogenase (Ubiquinone) Fe-S protein 6 rel
ated cluster
135
1
70
0.99
1
0.9
116
view hsps
UniRef90_P52503
NADH-ubiquinone oxidoreductase 13 kDa-A subunit re
lated cluster
125
1
64
0.9
1
0.906
82
view hsps
UniRef90_Q6IBC4
NDUFS6 protein related cluster
124
1
70
0.99
1
0.829
124
view hsps
UniRef90_P52504
NADH-ubiquinone oxidoreductase 13 kDa-A subunit, m
itochondrial precursor related cluster
123
1
64
0.9
1
0.938
116
view hsps
UniRef90_UPI0000447ABE
Cluster related to UPI0000447ABE; PREDICTED: simil
ar to NADH dehydrogenase (ubiquinone) Fe-S protein
6, 13kDa (NADH-coenzyme Q reductase); NADH dehydr
ogenase (ubiquinone) Fe-S protein 6 (13kD) (NADH-c
oenzyme Q reductase)
122
1
70
0.99
1
0.8
128
view hsps
UniRef90_UPI00004A72A7
Cluster related to UPI00004A72A7; PREDICTED: simil
ar to NADH dehydrogenase (ubiquinone) Fe-S protein
6, 13kDa (NADH-coenzyme Q reductase)
120
1
70
0.99
1
0.771
367
view hsps
UniRef90_P23934
NADH-ubiquinone oxidoreductase 13 kDa-A subunit, m
itochondrial precursor related cluster
115
1
70
0.99
1
0.743
124
view hsps
UniRef90_Q6GPQ9
MGC82679 protein related cluster
112
1
70
0.99
1
0.729
133
view hsps
UniRef90_Q4SIN3
Chromosome 21 SCAF14577, whole genome shotgun sequ
ence related cluster
109
1
70
0.99
1
0.686
128
view hsps
UniRef90_Q66I52
Zgc:103774 related cluster
106
1
70
0.99
1
0.671
129
view hsps
UniRef90_UPI00003C0A4E
Cluster related to UPI00003C0A4E; PREDICTED: simil
ar to CG8680-PA
91
1
61
0.86
1
0.656
124
view hsps
UniRef90_Q9VMU0
CG8680-PA related cluster
79
1
61
0.86
1
0.574
126
view hsps
UniRef90_Q7PW69
ENSANGP00000016606 related cluster
71
2
61
0.85
1
0.567
83
view hsps
UniRef90_UPI0000491B04
Cluster related to UPI0000491B04; PREDICTED: simil
ar to NADH dehydrogenase (ubiquinone) Fe-S protein
6, 13kDa (NADH-coenzyme Q reductase); NADH dehydr
ogenase (ubiquinone) Fe-S protein 6 (13kD) (NADH-c
oenzyme Q reductase)
70
1
39
0.55
1
0.846
262
view hsps
UniRef90_UPI00001CED37
Cluster related to UPI00001CED37; PREDICTED: simil
ar to NADH dehydrogenase (ubiquinone) Fe-S protein
6, 13kDa (NADH-coenzyme Q reductase)
69
1
54
0.76
1
0.611
128
view hsps
UniRef90_Q19724
Probable NADH-ubiquinone oxidoreductase 13 kDa-A s
ubunit, mitochondrial precursor related cluster
68
2
61
0.85
1
0.567
140
view hsps
UniRef90_Q5DC02
Hypothetical protein related cluster
60
2
61
0.85
1
0.483
116
view hsps
UniRef90_Q7RWU3
Hypothetical protein related cluster
59
24
61
0.54
1
0.684
165
view hsps
UniRef90_Q55I93
Hypothetical protein related cluster
57
20
61
0.59
1
0.595
194
view hsps
UniRef90_Q4WE81
NADH-ubiquinone oxidoreductase related cluster
56
24
61
0.54
1
0.605
214
view hsps
UniRef90_Q527M2
Hypothetical protein related cluster
56
24
61
0.54
1
0.553
170
view hsps
UniRef90_Q4P288
Hypothetical protein related cluster
56
24
61
0.54
1
0.632
211
view hsps
UniRef90_Q5AUI1
Lactobacillus shifted protein related cluster
56
24
61
0.54
1
0.605
213
view hsps
UniRef90_Q8J0P6
NADH-ubiquinone oxidoreductase related cluster
54
24
61
0.54
1
0.553
211
view hsps
UniRef90_Q4I799
Hypothetical protein related cluster
52
24
61
0.54
1
0.579
164
view hsps

TrapCLuster TCL26549
Public Clones  
Private Clones OST68733 (lexicon)
 
TrapCLuster TCL26550
Public Clones  
Private Clones OST248107 (lexicon) OST65649 (lexicon) OST345232 (lexicon)