TrapCLuster-Gene Report for TCLG2627

Internal Id  
2627
 
Accession  
TCLG2627
 
Sequence  
AGATCAGATTATCCTGTGTTGGTGGCAGCAGAGAAGAGTATTAATGACAAGTAGTGAATTGGAGCACACTGTAAAGTAAA
 
TACACAGATCTCATCCAGGCAGCAGGTTGGATGGTCGCTGTCCCAGGCCCTGGAAGGGCCTTGTTTCTGCTTCAGGTAGC
 
CATTTGATTTTAACTCTCAAGCCTCTTGGAAAATCTAAATGAGACTTCCATCAGCCTTAATAAAAACACAGAATAACCCA
 
AgactccaagcaaccaggtatcttggctggcacatggcttctgttgtggttcaatctgaagACCTTCCCAGGAGGAGGAG
 
CTGAGCCCCAAGGCACTGAAGTTCCACACAACTGTGAAGAACCTGGACTTTTACAAGATGGGCTCCTGCCTGCAGCTGGA
 
TTCTCCAGCTGTTTAAACCTTTGTTACAAAAACCCCAGTTCCAGCTTCATGATGCTTTTAATTAATTATTTCC
 
RNA length  
473
 
Type  
gene
 
Overlapping 
 
Novel only  
1
 
RT-PCR confirmed  
1
 
LORF Length  
41
 
LORF-Blastp Result  
0
 
Go To Ensembl 
Go To UCSC 

Internal Id  Chromosome  Start  End  Strand  Mouse Release  
1316
 		 
8
 		 
23967926
 		 
24229740
 		 
-1
 		 
NCBIM34
 



Longest ORF Translation Length Strand 
ATGAGACTTCCATCAGCCTTAATAAAAACACAGAATAACCCAAgactcca
agcaaccaggtatcttggctggcacatggcttctgttgtggttcaatctg
aagACCTTCCCAGGAGGAGGAGCT
 
MRLPSALIKTQNNPRLQATRYLGWHMASVVVQSEDLPRRRS
 
41
 
+

BLASTP Hit ID (ORF) Description Score Start End Frac Aligned Query Num Hsps Frac Identical Length   
No BLASTP result for Longest-ORF!

TrapCLuster TCL27854
Public Clones  
Private Clones OST472207 (lexicon)
 
TrapCLuster TCL27855
Public Clones  
Private Clones OST441166 (lexicon)
 
TrapCLuster TCL27856
Public Clones CMHD-GT_209C11-3 (cmhd)
Private Clones OST372578 (lexicon) OST18426 (lexicon) OST24591 (lexicon)
OST372574 (lexicon)