TrapCLuster-Gene Report for TCLG2810

Internal Id  
2810
 
Accession  
TCLG2810
 
Sequence  
GGACCACAGGAGAGAGCCAGGCAGTCCTGCAACCTCACAACCTCACCAAGTGCAGGTTCAGGGTGGTGGCAACTGCGGGA
 
GCTGAAGTCAAGTCTGAGGGATAAAAAAACAGTGCCCGTGGCAGCATCCAGACCTTTGGCATTGGAAGAATCCAAACGCT
 
TGGGCCTCTGGTTCGACTCTGAAGCATCCTTGGGGAGGACGGCCAGCTCCACGGAGTTTGAAAAGGGCCCTTCTCCCACC
 
TCGTTGGACGCAGATATCTTGACAATGTACACGTTCCCTGCCACCAGGTTTTCCAGCAAAGCCATGGTGATTGCCCCTAG
 
AAACATCACAAATTAAGTAAACTTTTACAGCCATGCAAACATGAGTCTGCATTTAAGAAGTATTTTTCTGAGGGTAAATG
 
Taggctctaagggatggacactgtcagactcctcctcgatgcctgggttgtcctaattaaaatgactgtcagtggaacag
 
ccaacccaatataGATGCATCATCACTGCACAAATTACACCAAGGACTTCCCTAAGCGCAGCAGAAACATGCTGGTGAGC
 
TGTAGTTAAAGTCACCTGGAATCTCTGAAGCTACCTTCCAAGCTTCTGCTGTGTAGACCTTGGACAGACCACTCCCTAAA
 
GCCTACGTGGTTATCTCAAGAACGTGCTCTTCCTGTCCTGTGCTTTATAGACAGGTCAGTGTGTGTACAGTGCAGAATCT
 
GACCTTCCTGGGTTAACCGCATAGCTGGACTGTAACACTCTTGCCATCAGCTCAGTTTGCTGAATACTGCTTAGTCACCT
 
GAAGAGGTGGTGACCTGAAGGAGTTCCCTCTCCTGGCCTAAGTCCAACCTCACACCCAAAGCAGTTGCCAAGTCAACCAC
 
CATCCAGAGGATCACTTACACTGACGGTTTGCTCAGATGACGTCAATATAAAGAAAATCTGTAAATCACAAACTTTATGA
 
CAACTGGAATAAGAAATGAGCAGGTCTT
 
RNA length  
988
 
Type  
antisense
 
Overlapping 
 
Novel only  
1
 
RT-PCR confirmed  
1
 
LORF Length  
111
 
LORF-Blastp Result  
0
 
Go To Ensembl 
Go To UCSC 

Internal Id  Chromosome  Start  End  Strand  Mouse Release  
599
 		 
9
 		 
72942738
 		 
73037494
 		 
-1
 		 
NCBIM34
 



Longest ORF Translation Length Strand 
GGACCACAGGAGAGAGCCAGGCAGTCCTGCAACCTCACAACCTCACCAAG
TGCAGGTTCAGGGTGGTGGCAACTGCGGGAGCTGAAGTCAAGTCTGAGGG
ATAAAAAAACAGTGCCCGTGGCAGCATCCAGACCTTTGGCATTGGAAGAA
TCCAAACGCTTGGGCCTCTGGTTCGACTCTGAAGCATCCTTGGGGAGGAC
GGCCAGCTCCACGGAGTTTGAAAAGGGCCCTTCTCCCACCTCGTTGGACG
CAGATATCTTGACAATGTACACGTTCCCTGCCACCAGGTTTTCCAGCAAA
GCCATGGTGATTGCCCCTAGAAACATCACAAATT
 
GPQERARQSCNLTTSPSAGSGWWQLRELKSSLRDKKTVPVAASRPLALEE
SKRLGLWFDSEASLGRTASSTEFEKGPSPTSLDADILTMYTFPATRFSSK
AMVIAPRNITN
 
111
 
+

BLASTP Hit ID (ORF) Description Score Start End Frac Aligned Query Num Hsps Frac Identical Length   
No BLASTP result for Longest-ORF!

TrapCLuster TCL29879
Public Clones  
Private Clones OST138520 (lexicon) OST53469 (lexicon) OST41892 (lexicon)
OST289948 (lexicon) OST339665 (lexicon) OST319417 (lexicon)
OST357010 (lexicon) OST134744 (lexicon) OST76939 (lexicon)
OST314299 (lexicon) OST246695 (lexicon)
 
TrapCLuster TCL29880
Public Clones  
Private Clones OST419364 (lexicon)
 
TrapCLuster TCL29881
Public Clones  
Private Clones OST14749 (lexicon) OST24660 (lexicon) OST29443 (lexicon)