TrapCLuster-Gene Report for TCLG3471

Internal Id  
3471
 
Accession  
TCLG3471
 
Sequence  
AGGTAAAGTCTGGTGCTGATGAGATGGCTCTGTGGATACTTGCTGctaaagcctgtgagcgtcctgaacaggaagtctat
 
gcgtggtgtgttcggctctgggagaaaacatgaaataaggaagtcccaagctgagatctgccactgccctggtatactgt
 
gctggctggaaaccacttcatctcctccagttccacagAGCCAGCCATTGACGCTCACCCAGACAGAAGAGCTCTTTTCA
 
CTTCCGAACATGGGGGCCCTTGGAAATTGGGAACCTCTCACGAGCTATTTAGAAGAGACCTTGCTTTGGGTAATGTCCGT
 
TCTGGGAGTAAAAACAGAGGCAGCGAAAcctctgggaaggcaccccttgtttctttcccccggcggtctggagcacccgc
 
agcacaccgcttccagagactgagtgaagaggccctctggaataggaagcgcgctgtgcacaggctgacctgtattctgg
 
ctctctcacctggaatcaggctccacagatcctgttatgcattgaatagtaacaaaacaacagcataaattagagtgttg
 
ctaagattgtgtaccatcaacgtttgcatgaacataatggacgtaatgaattctatagcactatcctgcacagcttggag
 
agattaaaatgactttgtctttaaattaaaAGCCGAACTTACTTCCTTTGCGTCCAGACTGCATCATCATACGACGGCGA
 
ACCGTGTCAAAAGGATAGGAAGTCAGGCCAGCGACAGCAGTGACAGACTGTGCAATCATCCAGCTGATGAAGATGTGAGT
 
ATTCTTGGGATCTGGGAGCATTCCTG
 
RNA length  
826
 
Type  
antisense
 
Overlapping 
 
Novel only  
1
 
RT-PCR confirmed  
1
 
LORF Length  
134
 
LORF-Blastp Result  
0
 
Go To Ensembl 
Go To UCSC 

Internal Id  Chromosome  Start  End  Strand  Mouse Release  
3411
 		 
X
 		 
31418288
 		 
31426930
 		 
-1
 		 
NCBIM34
 



Longest ORF Translation Length Strand 
ATGAGATGGCTCTGTGGATACTTGCTGctaaagcctgtgagcgtcctgaa
caggaagtctatgcgtggtgtgttcggctctgggagaaaacatgaaataa
ggaagtcccaagctgagatctgccactgccctggtatactgtgctggctg
gaaaccacttcatctcctccagttccacagAGCCAGCCATTGACGCTCAC
CCAGACAGAAGAGCTCTTTTCACTTCCGAACATGGGGGCCCTTGGAAATT
GGGAACCTCTCACGAGCTATTTAGAAGAGACCTTGCTTTGGGTAATGTCC
GTTCTGGGAGTAAAAACAGAGGCAGCGAAAcctctgggaaggcacccctt
gtttctttcccccggcggtctggagcacccgcagcacaccgcttccagag
act
 
MRWLCGYLLLKPVSVLNRKSMRGVFGSGRKHEIRKSQAEICHCPGILCWL
ETTSSPPVPQSQPLTLTQTEELFSLPNMGALGNWEPLTSYLEETLLWVMS
VLGVKTEAAKPLGRHPLFLSPGGLEHPQHTASRD
 
134
 
+

BLASTP Hit ID (ORF) Description Score Start End Frac Aligned Query Num Hsps Frac Identical Length   
No BLASTP result for Longest-ORF!

TrapCLuster TCL31498
Public Clones  
Private Clones OST459871 (lexicon) OST202975 (lexicon)
 
TrapCLuster TCL31499
Public Clones  
Private Clones OST310540 (lexicon) OST39853 (lexicon) OST309212 (lexicon)
OST434902 (lexicon) OST278257 (lexicon) OST287377 (lexicon)
 
TrapCLuster TCL31500
Public Clones  
Private Clones OST391909 (lexicon)
 
TrapCLuster TCL31501
Public Clones  
Private Clones OST372365 (lexicon)