TrapCLuster-Gene Report for TCLG3643

Internal Id

Accession

TCLG3643

Sequence

AGGTAATTGACACTTAGGAACACTTGAAAAAGCGACAGGAGTGGACTGTGACCAGCGCCTTCGGCTTCTCACCGTGTTTG

ACTTTGCCATAGCGTCTCGATGATTGGTTTTACAGAGCTCACTAGGTAGGCATAGAGCATAATAAACACACACATATATG

GGCAATTTGGCAAAATCTACATGCCTTTATAAACCTGTAGGCACCAAGAGGCCTGGGGCATGGGGGTGTGATTGAAATAA

AGTAAGTGTGCCTAaggtgtgcccgccgtaacatccatcctgggttttaggaccctgtccgctgctgaggctgggctcat

atgctgttccctcaggtgcctggcagctggcatagctttcactctgcagactaattcttcagtgggcaggagtgctgtgg

attagagacacacctttgtgattaaagattaaagccaccatgactctgacaagtgaccttcatctctgcctgactgcagg

gtagactctgccttccttttgtaaagaaaatgaaaaccacaaagacgtgtcatcagccgccaaggcggcgggccagtgct

gagcagctccgtcaggagcacacatcctccacaggacaagactgtggagctcatcatgatttcctgcagctcctctgttt

acttctgtaatgtggcctgctttgagtccaaatagaagtgtcacagcagtttcgaaaCTAGCCTCCGTTCTGACCTGACC

TGGGCTTCATTCAGTTGATGTTGGGGCCACACCCAAAGTTTGCCAGTTTGGGAGagctcttgcgtatagcgcctggcata

cagaagatgggactgtttttaattagggggaaaaaggagaattacgtgcaaaggagaccatc

RNA length

Type

nested

Overlapping

Novel only

RT-PCR confirmed

LORF Length

LORF-Blastp Result

Go To Ensembl

Go To UCSC

Internal Id	Chromosome	Start	End	Strand	Mouse Release
1967	11	19886922	19892054	1	NCBIM34

Longest ORF

Translation

Length

Strand

atgatgagctccacagtcttgtcctgtggaggatgtgtgctcctgacgga
gctgctcagcactggcccgccgccttggcggctgatgacacgtctttgtg
gttttcattttctttacaaaaggaaggcagagtctaccctgcagtcaggc
agagatgaaggtcacttgtcagagtcatggtggcttt

MMSSTVLSCGGCVLLTELLSTGPPPWRLMTRLCGFHFLYKRKAESTLQSG
RDEGHLSESWWL

BLASTP Hit ID (ORF)	Description	Score	Start	End	Frac Aligned Query	Num Hsps	Frac Identical	Length
No BLASTP result for Longest-ORF!

TrapCLuster	TCL3351
Public Clones
Private Clones	OST261277 (lexicon) OST374136 (lexicon) OST420664 (lexicon) OST214055 (lexicon) OST457712 (lexicon) OST118881 (lexicon) OST32171 (lexicon) OST88275 (lexicon) OST68763 (lexicon) OST85812 (lexicon) OST224455 (lexicon) OST143188 (lexicon) OST63955 (lexicon) OST81543 (lexicon) OST303667 (lexicon) OST109293 (lexicon)