TrapCLuster-Gene Report for TCLG392

Internal Id  
392
 
Accession  
TCLG392
 
Sequence  
GTTAGAGGCTCCCATGGATCTCTCTCCCTTAAGTTGCTTCAGTCAAGCACTTTGAATAACAAAAGAAATGACTGAAAAAG
 
AAGCTGCAGCACCAGACCCAAGAATGCCTCCCTGCTGACAGCCAGGCCTGAGGGTTCTCGGCCCAGCAACAGCGATGTGC
 
ATTTCTCTCAAAGCCAAGAAAGAAGATCTGGGATCTCAGGTTGTCTTTCCCCCTACATTCATCCCTTCCAGAGTCCTCAA
 
AATAAACACGAGAGAACTGTTCCAAGGACTATAAcctacctttcaggaagccctcccccagatctcatctgggaaacagg
 
ctcaggaaggactaaaggatagtctcaggttctgcacggcccaagttttcaaaccagctcatagctcagctcttccttct
 
ggaagtctccagcaatgtttcagtctgcactttgagaagaggagcccttgttacctgccaccttctcacaccatcccctg
 
gggatgctcccaggaaacaggaacaactccctcccctctcccagggtaccatgcagggatgcacccaggctttcagaact
 
tgactgaaaagaacgttttaggtctttctgAGGTTCCCAGAGGCAGAAGCCACACTGCTCCGCTTCGGCTTTTAAATGAA
 
ATCACCTGCAACTCCCGCCGGCGGCACCGAAGTGCAGAAGATGCCCAGGTTTCCGGAGCAACAGCTCAGCGTCATCTATC
 
TCCGCCCCGCGGCGCCTTTCCCGCCAAAGGCCGTTACCACCGCGGAGCATGGTGGGACACGCTTGCAAGATAGGTTTCAC
 
CCAATCTTTTTAGAGCGCCGAGCTGCTTTCAGAGAGGGTCTACCCCCGAGGTGGCCGACGATTCTGGACTCAGTGGGGAT
 
TAATAATAACCGCTTTAACCAGA
 
RNA length  
903
 
Type  
gene
 
Overlapping 
 
Novel only  
1
 
RT-PCR confirmed  
1
 
LORF Length  
89
 
LORF-Blastp Result  
0
 
Go To Ensembl 
Go To UCSC 

Internal Id  Chromosome  Start  End  Strand  Mouse Release  
4680
 		 
11
 		 
87755797
 		 
87775465
 		 
1
 		 
NCBIM34
 



Longest ORF Translation Length Strand 
ATGAAATCACCTGCAACTCCCGCCGGCGGCACCGAAGTGCAGAAGATGCC
CAGGTTTCCGGAGCAACAGCTCAGCGTCATCTATCTCCGCCCCGCGGCGC
CTTTCCCGCCAAAGGCCGTTACCACCGCGGAGCATGGTGGGACACGCTTG
CAAGATAGGTTTCACCCAATCTTTTTAGAGCGCCGAGCTGCTTTCAGAGA
GGGTCTACCCCCGAGGTGGCCGACGATTCTGGACTCAGTGGGGATTAATA
ATAACCGCTTTAACCAGA
 
MKSPATPAGGTEVQKMPRFPEQQLSVIYLRPAAPFPPKAVTTAEHGGTRL
QDRFHPIFLERRAAFREGLPPRWPTILDSVGINNNRFNQ
 
89
 
+

BLASTP Hit ID (ORF) Description Score Start End Frac Aligned Query Num Hsps Frac Identical Length   
No BLASTP result for Longest-ORF!

TrapCLuster TCL4055
Public Clones  
Private Clones OST131283 (lexicon)
 
TrapCLuster TCL4056
Public Clones  
Private Clones OST404753 (lexicon)
 
TrapCLuster TCL4057
Public Clones  
Private Clones OST260166 (lexicon) OST115825 (lexicon) OST397404 (lexicon)
OST108670 (lexicon) OST144256 (lexicon)