TrapCLuster-Gene Report for TCLG400

Internal Id

Accession

TCLG400

Sequence

GTGTTGTGTCGCTATTTCCTTGGAATCGAAACACTTCCTTCTGAAGGGGAACTCACTCATAAGACTCAGGATGCTCAGAA

AGTTAGGACTCAGGAGGCCTTGCTCCCTGGGGTTAGATAAGTTGGAAGAAATGGCTGAGAGATCAGAAACTCTTCCGTGG

AGCTGCTGGGAAGTTGAGCAGGAAACTCCAGGGATGAAGCCAGcagagagtggcgaggaatgcaaggaggtcctggtccc

aagacctcagcttgcctggagccagaagccagggacctgaagggttttaaccacgtgttcatcagaaccgaataaagaga

cctgggctcccactagttacctatcctgagtcccattccccagcttttccttgaggtcaccattctctggaccctctgac

ctcaaagtgCCAGAGCGACCACAAACCACTCCCACGAGAGGACCTGGATGATGGACCAGAAAGTAAGAGGACCAGTTCTG

ACTACCTGCCTCACCAGCCTCGGAAGGGGCGCAGCTTAGAGCCAGGGGTCCTAGAGGCTCCCTGGCCAGAAAGCCAAAAT

CTCTGGTTAGGATCATCACAGAGTCTCAAGGGAAGGGCCTCCCTGCCTGCTGGGCCATCTGGACCCTGATCCTGTGTGTG

TGAGCTTGTGTATGAGTATGCTTCTGTGTCTTACAGGCCATGTGGGTGGCTGGGAGCTGTAGAGTCATGACCCAGCCCTC

CTAGCAAGCCTCTGGCTCCCCTGTGGTCAGTTTCACTCTGACATCTGGTCCAGTTCACAGCTGGCCAGCTTCCTGCATGG

CAGTTTTTCACTTTCCCTCTCTGAGATCTGGGAGCAAAGGCCTCCTCACCCCGTTCTTTCCCCCCACCCACTTCTTGACT

GCATACGAGAAGTTGCTAGATTCTGGTCAAAACTTCTAGAAAAgcccaggcactcggtgcacggcttgcacggctcggtg

gcgctcaccacgtcagagaacgtaacacctgcggacaacaacacacacacggggaagcatcagcggcagaacttagtcac

aaggacggtgtttgagcacgggcatgtgaatacaggactggaatccctctgtccccatcctcagctaggactgctgcctc

tgtctcagcttcaccttcttattgacactctctttgctggagtccctcaccctcagcctgagaaagctggtttggcatct

gactgggaaggagacccattccccaggtcccagaagagtcggccctggggcatcctgaggtcccagctgtttaggtaaat

tccttgttctcagagagttcccggacctgtaccctagttcccagcacaactaaaatataatatgaatggttccgtccagc

ctcacac

RNA length

Type

antisense

Overlapping

Novel only

RT-PCR confirmed

LORF Length

LORF-Blastp Result

Go To Ensembl

Go To UCSC

Internal Id	Chromosome	Start	End	Strand	Mouse Release
4903	11	95374940	95399800	1	NCBIM34

Longest ORF

Translation

Length

Strand

TGTTGTGTCGCTATTTCCTTGGAATCGAAACACTTCCTTCTGAAGGGGAA
CTCACTCATAAGACTCAGGATGCTCAGAAAGTTAGGACTCAGGAGGCCTT
GCTCCCTGGGGTTAGATAAGTTGGAAGAAATGGCTGAGAGATCAGAAACT
CTTCCGTGGAGCTGCTGGGAAGTTGAGCAGGAAACTCCAGGGATGAAGCC
AGcagagagtggcgaggaatgcaaggaggtcctggtcccaagacctcagc
ttgcctggagccagaagccagggacct

CCVAISLESKHFLLKGNSLIRLRMLRKLGLRRPCSLGLDKLEEMAERSET
LPWSCWEVEQETPGMKPAESGEECKEVLVPRPQLAWSQKPGT

BLASTP Hit ID (ORF)	Description	Score	Start	End	Frac Aligned Query	Num Hsps	Frac Identical	Length
No BLASTP result for Longest-ORF!

TrapCLuster	TCL4137
Public Clones
Private Clones	OST294914 (lexicon) OST315869 (lexicon) OST56397 (lexicon) OST79942 (lexicon) OST391570 (lexicon) OST290884 (lexicon) OST165422 (lexicon) OST90833 (lexicon) OST136049 (lexicon) OST345480 (lexicon) OST234955 (lexicon) OST173475 (lexicon) OST241389 (lexicon) OST189523 (lexicon) OST230417 (lexicon) OST288334 (lexicon) OST223365 (lexicon) OST311176 (lexicon) OST122979 (lexicon) OST126775 (lexicon) OST394019 (lexicon) OST300298 (lexicon) OST83706 (lexicon) OST17999 (lexicon) OST466170 (lexicon) OST187290 (lexicon) OST63856 (lexicon) OST117321 (lexicon) OST326242 (lexicon) OST200051 (lexicon) OST270062 (lexicon) OST43740 (lexicon) OST200541 (lexicon) OST143618 (lexicon) OST252355 (lexicon) OST178068 (lexicon) OST103291 (lexicon) OST78281 (lexicon) OST24571 (lexicon) OST407665 (lexicon) OST442678 (lexicon)

TrapCLuster	TCL4138
Public Clones
Private Clones	OST247931 (lexicon) OST28982 (lexicon)