TrapCLuster-Gene Report for TCLG411

Internal Id 
411
 
Accession 
TCLG411
 
Sequence 
AGGAACAGGGTGAGGACATGAAAGTGTGACAACTGATTGAAAAGGAAGTTGACATCCATCGTGAACAGAGAATCCTGTGA
TTTGGACTAATCTGTACCCTGGAAGGTTATCTTGTACCCCCTGCCCTCCAATGAATTGTAGATAAAGGAGATGAATTGAa
gactttaatgaatatattttacaaatacactggagaatcatgcaatgctgcctgcgttggatgcaattctgggccacaag
tctgcacactcctttgccactggacctgtgatagcagagcctgtttggaagagaagacaggtcagacagggtccttgtcc
tgtgactcttctagagtcacccagcagaaacatacaatggtggcttaaacctccacgtacctttcatctctcctttattg
tttactatgacccctgcgttatcttcaaagtaaagaaacaccccatcttttcttcgatatgaTAGCAAGCCAGAATCTGG
TTTTGTTGAAGCTTTGTGCTGCCTCTTGACGGGGTCACCGAGTGCGCTATGAATTAATGAGAAGAATCTGGGCAGTCTGT
AAGCTAGGAAACAAATCTCAGCAAATGTTCTGATCCAAGTGGTGATTGATTCTGCAGAGAGCAGGCGACAGTTCTGCAAA
TTCATAATTTAAATTCACGGTTTCAAATTATTGGTGAagtgaagggagctgacgagtgctcctcccggtttcacggtctc
ggagcgcttttactcggtccacgtcaccaagtcacaatgaaacgtgaggatatagaataataaggatcatagaatgaaac
gaaa
 
RNA length 
804
 
Type 
antisense
 
Overlapping 
 
 
Novel only 
1
 
RT-PCR confirmed 
1
 
LORF Length 
102
 
LORF-Blastp Result 
1
 
Go To Ensembl 
Go To UCSC 

Internal Id  Chromosome  Start  End  Strand  Mouse Release 
494
 
11
 
97591132
 
97619622
 
1
 
NCBIM34
 



Longest ORF Translation Length Strand
ATGAATTTGCAGAACTGTCGCCTGCTCTCTGCAGAATCAATCACCACTTG
GATCAGAACATTTGCTGAGATTTGTTTCCTAGCTTACAGACTGCCCAGAT
TCTTCTCATTAATTCATAGCGCACTCGGTGACCCCGTCAAGAGGCAGCAC
AAAGCTTCAACAAAACCAGATTCTGGCTTGCTAtcatatcgaagaaaaga
tggggtgtttctttactttgaagataacgcaggggtcatagtaaacaata
aaggagagatgaaaggtacgtggaggtttaagccaccattgtatgtttct
gctgggt
MNLQNCRLLSAESITTWIRTFAEICFLAYRLPRFFSLIHSALGDPVKRQH
KASTKPDSGLLSYRRKDGVFLYFEDNAGVIVNNKGEMKGTWRFKPPLYVS
AG
102
-

BLASTP Hit ID (ORF) Description Score Start End Frac Aligned Query Num Hsps Frac Identical Length  
UniRef90_UPI00004499B9
Cluster related to UPI00004499B9; PREDICTED: simil
ar to ribosomal protein L23
62
62
90
0.28
1
0.966
130
view hsps
UniRef90_Q9YHX0
Ribosomal protein L17 homolog related cluster
62
62
90
0.28
1
0.966
143
view hsps
UniRef90_P62829
60S ribosomal protein L23 related cluster
62
62
90
0.28
1
0.966
140
view hsps
UniRef90_Q4VS19
Ribosomal protein L23-like protein related cluster
60
63
90
0.27
1
0.929
99
view hsps
UniRef90_Q9GNE2
60S ribosomal protein L23 related cluster
58
63
90
0.27
1
0.893
140
view hsps
UniRef90_Q6JWX1
60S ribosomal protein L23 related cluster
57
32
90
0.58
1
0.542
140
view hsps
UniRef90_P48158
60S ribosomal protein L23 related cluster
57
63
90
0.27
1
0.857
140
view hsps
UniRef90_P48159
60S ribosomal protein L23 related cluster
57
63
90
0.27
1
0.857
140
view hsps
UniRef90_Q8IT99
Ribosomal protein L17A related cluster
56
62
90
0.28
1
0.862
140
view hsps
UniRef90_Q4KTG3
L23 related cluster
56
63
90
0.27
1
0.893
138
view hsps
UniRef90_O42867
60S ribosomal protein L23 related cluster
55
62
90
0.28
1
0.828
139
view hsps
UniRef90_Q5DAQ3
Hypothetical protein related cluster
55
62
90
0.28
1
0.793
140
view hsps
UniRef90_Q70MM4
Ribosomal protein L17A related cluster
55
64
90
0.26
1
0.889
129
view hsps
UniRef90_P49690
60S ribosomal protein L23 related cluster
55
63
90
0.27
1
0.857
140
view hsps
UniRef90_Q4P8N0
RL23_AEDAE 60S ribosomal protein L23 related clust
er
54
63
90
0.27
1
0.857
136
view hsps
UniRef90_Q6BV70
Debaryomyces hansenii chromosome C of strain CBS76
7 of Debaryomyces hansenii related cluster
54
63
90
0.27
1
0.857
123
view hsps
UniRef90_Q5K959
60s ribosomal protein l23, putative related cluste
r
54
63
90
0.27
1
0.821
138
view hsps
UniRef90_P04451
60S ribosomal protein L23 related cluster
54
62
90
0.28
1
0.828
137
view hsps
UniRef90_Q59M73
Likely cytosolic ribosomal protein L23 related clu
ster
53
63
90
0.27
1
0.821
115
view hsps
UniRef90_UPI00004190BE
Cluster related to UPI00004190BE; PREDICTED: simil
ar to ribosomal protein L23
53
43
90
0.47
1
0.583
151
view hsps
UniRef90_Q4WI20
Alkaline serine protease related cluster
52
63
90
0.27
1
0.786
127
view hsps
UniRef90_Q4FW90
60S ribosomal protein L23, putative related cluste
r
52
62
90
0.28
1
0.793
139
view hsps
UniRef90_Q5EN14
60S ribosomal protein L23-like protein related clu
ster
52
63
90
0.27
1
0.821
139
view hsps
UniRef90_UPI0000585FBB
Cluster related to UPI0000585FBB; PREDICTED: simil
ar to CG3661-PA
52
64
89
0.25
1
0.846
91
view hsps
UniRef90_Q5CXL5
60S ribosomal protein L23, transcript identified b
y EST related cluster
51
62
90
0.28
1
0.759
146
view hsps
UniRef90_Q873R3
Alkaline serine protease related cluster
51
63
90
0.27
1
0.821
230
view hsps
UniRef90_Q4N5G7
60S ribosomal protein L23, putative related cluste
r
50
62
90
0.28
1
0.724
139
view hsps
UniRef90_Q5EY88
Large subunit ribosomal protein L23 related cluste
r
50
62
90
0.28
1
0.724
139
view hsps
UniRef90_Q50Y87
60S ribosomal protein L23, putative related cluste
r
50
62
90
0.28
1
0.793
140
view hsps

TrapCLuster TCL4220
Public Clones  
Private Clones OST173005 (lexicon) OST124106 (lexicon)
 
TrapCLuster TCL4221
Public Clones  
Private Clones OST373119 (lexicon) OST95994 (lexicon)
 
TrapCLuster TCL4222
Public Clones  
Private Clones OST80742 (lexicon) OST111040 (lexicon)
 
TrapCLuster TCL4223
Public Clones  
Private Clones OST94624 (lexicon)