TrapCLuster Report for TCL11263

Internal ID 
11263
 
Accession 
TCL11263
 
Sequence 
gcaaaccaagatggagtatgattggaaacctgatgagcagggcttcagcagatcctgcagctgctcaaggagtcccagtc
cccagacaccaccatccagaggaccgtgcaacaaaaactggaacaactcaatcaatatccagattttaacaactacttga
tttttgttcttacaaaattaaaatctgaagatgagcccacacggtcattgagcggtctgatcttgaagaacaatgtgaaa
gctcattttcagaacttcccaaatggtgtgacagacttcatcaagagtgaatgtctaGAGTGAATGTCTAAATAACATTG
GGGACTCCTCTCCGTTGATCAGAGCCACTGTCGGTATTTTAATTACAACCATAGCCTCCAAGGGAGAGCTGCAGAATTGG
CCTGATCTCTTACCAAACCTCTGTAGCCTGCTGGATTCCGAAGACTACAACACTTGTGAGGGAGCCTTCGGTGCCCTTCA
GAAGATATGTGAGGACTCTGCAGAGATTTTAGACAGTGATGTCTTAGATCGCCCTCTCAACATCATGATCCCCAAGTTTT
TACAGTTTTTCAAGCACAGGAGTCCCAAAATAAGGTCTCGTGCTGTTGCATGTGTCAATCAGTTCATCATCAGCCGGACC
CAGGCGCTCATGCTGCACATGGATTCCTTCATTGAGAACCTCTTTGCACTGGCTGGCGACGAGGAAGCAGAGGTGCGGAA
GAACGTGTGCCGGGCGCTTGTGATGTTGCTTGAAGCCCGGATGGACCGCCTGCTTCCTCATATGCACAACATAGTCGAGT
ACATGCTGCAGAGAACCCAAGACCAAGATGAGAATGTAGCTCTGGAGGCCTGTGAATTCTGGCTGACTTTGGCTGAACAG
CCAATATGCAAAGATGTACTTGTAAGGCATCTACCAAAGTTGATTCCTGTGTTAGTGAATGGCATGAAGTACTCAGATAT
AGATATTATCCTGCTTAAG
 
RNA length 
979
 
Overlapping 
 
 
Blocks 
2
 
Traps 
9
 
Distance from gene 
0
 
Gene in slice 
1
 
Gene in slice (same strand) 
1
 
Human Conservation 
1
 
Dog Conservation 
1
 
Gallus Conservation 
1
 
Total Conservation 
1
 
LORF Length 
144
 
LORF-Blastp Result 
1
 
UTRscan Result 
0
 
Max UTR length 
0
 
Closest Gene (stable_id) 
ENSMUSG00000060459
 
Closest Gene (name) 
Kng2
 
Close to OMIM 
1
 
Disease 
[Kininogen deficiency] (3)
 
Go To Ensembl 
Go To UCSC 

Sorry, no results for your search.

Longest ORF Translation Length Strand
ATGATCCCCAAGTTTTTACAGTTTTTCAAGCACAGGAGTC
CCAAAATAAGGTCTCGTGCTGTTGCATGTGTCAATCAGTT
CATCATCAGCCGGACCCAGGCGCTCATGCTGCACATGGAT
TCCTTCATTGAGAACCTCTTTGCACTGGCTGGCGACGAGG
AAGCAGAGGTGCGGAAGAACGTGTGCCGGGCGCTTGTGAT
GTTGCTTGAAGCCCGGATGGACCGCCTGCTTCCTCATATG
CACAACATAGTCGAGTACATGCTGCAGAGAACCCAAGACC
AAGATGAGAATGTAGCTCTGGAGGCCTGTGAATTCTGGCT
GACTTTGGCTGAACAGCCAATATGCAAAGATGTACTTGTA
AGGCATCTACCAAAGTTGATTCCTGTGTTAGTGAATGGCA
TGAAGTACTCAGATATAGATATTATCCTGCTTA
MIPKFLQFFKHRSPKIRSRAVACVNQFIISRTQALMLHMD
SFIENLFALAGDEEAEVRKNVCRALVMLLEARMDRLLPHM
HNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLV
RHLPKLIPVLVNGMKYSDIDIILL
144 +

BLASTP Hit ID (ORF) Description Score Start End Frac Aligned Query Num Hsps Frac Identical Length  
UniRef90_Q92973 Transportin-1 (Importin beta-)2 related cluster 279 1 144 1 1 0.965 890 view hsps
UniRef90_UPI0000545E10 Cluster related to UPI0000545E10; PREDICTED: similar to transportin 1 265 1 144 1 1 0.896 974 view hsps
UniRef90_UPI000036132D Cluster related to UPI000036132D 254 1 144 1 1 0.882 763 view hsps
UniRef90_UPI00004A4023 Cluster related to UPI00004A4023; PREDICTED: similar to transportin 1 244 1 127 0.88 1 0.945 2147 view hsps
UniRef90_UPI0000363990 Cluster related to UPI0000363990 243 1 144 1 1 0.806 869 view hsps
UniRef90_Q4T934 Chromosome 3 SCAF7645, whole genome shotgun sequence related cluster 243 1 144 1 1 0.806 1145 view hsps
UniRef90_UPI0000363992 Cluster related to UPI0000363992 243 1 144 1 1 0.806 783 view hsps
UniRef90_UPI0000364967 Cluster related to UPI0000364967 242 1 144 1 1 0.812 763 view hsps
UniRef90_UPI0000515791 Cluster related to UPI0000515791; similar to transportin 1; karyopherin (importin) beta 2 241 1 144 1 1 0.771 901 view hsps
UniRef90_UPI0000494698 Cluster related to UPI0000494698; PREDICTED: transportin 2 (importin 3, karyopherin beta 2b) 239 1 144 1 1 0.799 977 view hsps
UniRef90_O14787 Transportin-2 related cluster 239 1 144 1 1 0.799 897 view hsps
UniRef90_Q99LG2 Transportin-2 related cluster 239 1 144 1 1 0.799 887 view hsps
UniRef90_UPI00004D595B Cluster related to UPI00004D595B 235 1 144 1 1 0.792 871 view hsps
UniRef90_UPI000058508B Cluster related to UPI000058508B; PREDICTED: similar to transportin 1, partial 234 1 144 1 1 0.771 735 view hsps
UniRef90_Q5TRB1 ENSANGP00000028987 related cluster 229 1 144 1 1 0.757 904 view hsps
UniRef90_Q4RZY5 Chromosome 18 SCAF14786, whole genome shotgun sequence related cluster 228 1 144 1 1 0.812 937 view hsps
UniRef90_O76331 Transportin related cluster 217 1 144 1 1 0.729 893 view hsps
UniRef90_UPI0000584953 Cluster related to UPI0000584953; PREDICTED: similar to transportin 1 209 16 144 0.9 1 0.767 701 view hsps
UniRef90_UPI00004EE112 Cluster related to UPI00004EE112; PREDICTED: similar to Karyopherin (importin) beta 2b 206 1 123 0.85 1 0.797 365 view hsps
UniRef90_UPI00004D2D65 Cluster related to UPI00004D2D65 204 1 144 1 1 0.75 811 view hsps
UniRef90_Q4SQI2 Chromosome 4 SCAF14533, whole genome shotgun sequence related cluster 197 1 144 1 1 0.722 576 view hsps
UniRef90_UPI0000449B46 Cluster related to UPI0000449B46; PREDICTED: similar to transportin 1; karyopherin (importin) beta 2; importin beta 2; M9 region interaction protein 193 37 144 0.75 1 0.889 1108 view hsps
UniRef90_Q8MSM3 AT21921p related cluster 172 1 144 1 1 0.576 853 view hsps
UniRef90_O14089 Putative importin beta-2 subunit related cluster 166 1 144 1 1 0.528 910 view hsps
UniRef90_Q4P666 Hypothetical protein related cluster 152 1 144 1 1 0.5 924 view hsps
UniRef90_O62332 Hypothetical protein imb-2 related cluster 139 1 140 0.97 1 0.421 883 view hsps
UniRef90_Q55CQ7 Hypothetical protein related cluster 135 1 140 0.97 1 0.414 931 view hsps
UniRef90_Q5KH73 Importin beta-2 subunit, putative related cluster 123 1 144 1 1 0.424 924 view hsps
UniRef90_Q9ZVW8 Putative transportin related cluster 121 2 144 0.99 1 0.441 827 view hsps
UniRef90_Q6BV45 Similar to CA0199|CaKAP104 Candida albicans related cluster 119 1 144 1 1 0.424 934 view hsps
UniRef90_Q8H2D6 Transportin related cluster 119 2 144 0.99 1 0.448 894 view hsps
UniRef90_Q9HE41 Related to IMPORTIN BETA-2 SUBUNIT related cluster 117 1 144 1 1 0.396 944 view hsps
UniRef90_Q4WRL4 Importin beta-2 subunit, putative related cluster 117 1 144 1 1 0.389 937 view hsps
UniRef90_Q4ILQ4 Hypothetical protein related cluster 113 1 144 1 1 0.389 944 view hsps
UniRef90_Q5BEV4 Hypothetical protein related cluster 105 1 144 1 1 0.368 916 view hsps
UniRef90_Q59ZG3 Hypothetical protein KAP104 related cluster 104 1 144 1 1 0.382 948 view hsps
UniRef90_P38217 Importin beta-2 subunit related cluster 94 1 144 1 1 0.382 918 view hsps
UniRef90_Q6C386 Yarrowia lipolytica chromosome F of strain CLIB99 of Yarrowia lipolytica related cluster 90 1 144 1 1 0.306 904 view hsps
UniRef90_Q756N5 AER219Cp related cluster 90 1 144 1 1 0.361 909 view hsps
UniRef90_Q6CUK1 Similar to sgd|S0000221 Saccharomyces cerevisiae YBR017c KAP104 beta- karyopherin related cluster 89 12 144 0.92 1 0.338 884 view hsps
UniRef90_Q6FQQ0 Similar to sp|P38217 Saccharomyces cerevisiae YBR017c KAP104 beta- karyopherin related cluster 79 1 144 1 1 0.354 917 view hsps
UniRef90_UPI000049408E Cluster related to UPI000049408E; PREDICTED: hypothetical protein XP_523581 64 111 143 0.23 1 0.879 483 view hsps

Public Clones XP0216 (sanger)
Private Clones OST220404 (lexicon) OST129073 (lexicon) OST220314 (lexicon) OST338502 (lexicon)
OST184181 (lexicon) OST271378 (lexicon) OST295239 (lexicon) OST182189 (lexicon)