TrapCLuster Report for TCL20964

Internal ID

Accession

TCL20964

Sequence

ccagatcctgccacagaatgggctccaaggagcagaggatgagtagatgagccggagcgccgctacccagtgcctattaa

agctgctcgctgccctgtcggtgagtgagcgttgtcactgtcttctctgcttaagcctgctgctgacagcgtggctccct

ctaccaattctccctccctgccactctactctctgcatcctccaacctttctctctcacaggattttaactagtccttgg

caccagagggtggttgctctacatgaggcacttgtctgttatcctaactaaagcattaccgcagatcactttagtccaag

ccaccatcaGATCAATTATCCTGCCCATCTTTAAAGAAGCCATCCAGTAAGGGTTCCAAGCCCCAGGAAGagatccaaca

atgacgccgagggagaaacagtggcaagaatatagaaaggggccttttcttgcgcccctcaaccttccttagtctatgaa

gttctgcctttcctactgcccacatccag

RNA length

Overlapping

Blocks

Traps

Distance from gene

Gene in slice

Gene in slice (same strand)

Human Conservation

Dog Conservation

Gallus Conservation

Total Conservation

LORF Length

LORF-Blastp Result

UTRscan Result

Max UTR length

Closest Gene (stable_id)

ENSMUSG00000028878

Closest Gene (name)

BC008163

Close to OMIM

Disease

Go To Ensembl

Go To UCSC

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Longest ORF	Translation	Length	Strand
atgagccggagcgccgctacccagtgcctattaaagctgc tcgctgccctgtcggtgagtgagcgttgtcactgtcttct ctgcttaagcctgctgctgacagcgtggctccctctacca attctccctccctgccactctactctctgcatcctccaac ctttctctctcacaggatttt	MSRSAATQCLLKLLAALSVSERCHCLLCLSLLLTAWLPLP ILPPCHSTLCILQPFSLTGF	60	+

BLASTP Hit ID (ORF)	Description	Score	Start	End	Frac Aligned Query	Num Hsps	Frac Identical	Length
No BLASTP result for Longest-ORF!

Public Clones	CMHD-GT_140B8-3 (cmhd)
Private Clones	OST40989 (lexicon) OST355837 (lexicon) OST252904 (lexicon) OST40453 (lexicon) OST427145 (lexicon) OST139579 (lexicon) OST79812 (lexicon) OST428835 (lexicon) OST301347 (lexicon) OST442952 (lexicon) OST419732 (lexicon) OST269761 (lexicon) OST416670 (lexicon) OST390239 (lexicon) OST389669 (lexicon) OST260973 (lexicon) OST425598 (lexicon) OST448245 (lexicon) OST267623 (lexicon) OST102417 (lexicon) OST65342 (lexicon) OST338661 (lexicon) OST66198 (lexicon) OST271998 (lexicon) OST453691 (lexicon) OST66166 (lexicon) OST334453 (lexicon) OST192399 (lexicon) OST282324 (lexicon) OST284472 (lexicon) OST437951 (lexicon) OST64628 (lexicon) OST445297 (lexicon) OST395488 (lexicon) OST54693 (lexicon) OST63870 (lexicon) OST372219 (lexicon) OST48527 (lexicon) OST107291 (lexicon) OST198123 (lexicon) OST67766 (lexicon) OST394944 (lexicon) OST434528 (lexicon) OST262776 (lexicon) OST451078 (lexicon) OST78719 (lexicon) OST47156 (lexicon) OST267333 (lexicon) OST409530 (lexicon) OST352942 (lexicon) OST85905 (lexicon) OST77348 (lexicon) OST266891 (lexicon) OST347908 (lexicon) OST67983 (lexicon) OST41893 (lexicon) OST464217 (lexicon)