TrapCLuster Report for TCL3351

Internal ID  
3351
 
Accession  
TCL3351
 
Sequence  
aggtaattgacacttaggaacacttgaaaaagcgacaggagtggactgtgaccagcgccttcggcttctcaccgtgtttg
 
actttgccatagcgtctcgatgattggttttacagagctcactaggtaggcatagagcataataaacacacacatatatg
 
ggcaatttggcaaaatctacatgcctttataaacctgtaggcaccaagaggcctggggcatgggggtgtgattgaaataa
 
agtaagtgtgcctaAGGTGTGCCCGCCGTAACATCCATCCTGGGTTTTAGGACCCTGTCCGCTGCTGAGGCTGGGCTCAT
 
ATGCTGTTCCCTCAGGTGCCTGGCAGCTGGCATAGCTTTCACTCTGCAGACTAATTCTTCAGTGGGCAGGAGTGCTGTGG
 
ATTAGAGACACACCTTTGTGATTAAAGATTAAAGCCACCATGACTCTGACAAGTGACCTTCATCTCTGCCTGACTGCAGG
 
GTAGACTCTGCCTTCCTTTTGTAAAGAAAATGAAAACCACAAAGACGTGTCATCAGCCGCCAAGGCGGCGGGCCAGTGCT
 
GAGCAGCTCCGTCAGGAGCACACATCCTCCACAGGACAAGACTGTGGAGCTCATCATGATTTCCTGCAGCTCCTCTGTTT
 
ACTTCTGTAATGTGGCCTGCTTTGAGTCCAAATAGAAGTGTCACAGCAGTTTCGAAActagcctccgttctgacctgacc
 
tgggcttcattcagttgatgttggggccacacccaaagtttgccagtttgggagAGCTCTTGCGTATAGCGCCTGGCATA
 
CAGAAGATGGGACTGTTTTTAATTAGGGGGAAAAAGGAGAATTACGTGCAAAGGAGACCATC
 
RNA length  
862
 
Overlapping 
 
Blocks  
4
 
Traps  
16
 
Distance from gene  
0
 
Gene in slice  
1
 
Gene in slice (same strand)  
1
 
Human Conservation  
0
 
Dog Conservation  
0
 
Gallus Conservation  
0
 
Total Conservation  
0
 
LORF Length  
62
 
LORF-Blastp Result  
0
 
UTRscan Result  
0
 
Max UTR length  
0
 
Closest Gene (stable_id)  
ENSMUSG00000045671
 
Closest Gene (name)  
Spred2
 
Close to OMIM  
0
 
Disease  
0
 
Go To Ensembl 
Go To UCSC 

Internal Id  Chromosome  Start  End  Strand  Release  
2364
 		 
NT_110159
 		 
6081
 		 
6169
 		 
1
 		 
NCBIM34
 

Longest ORF Translation Length Strand
ATGATGAGCTCCACAGTCTTGTCCTGTGGAGGATGTGTGC
TCCTGACGGAGCTGCTCAGCACTGGCCCGCCGCCTTGGCG
GCTGATGACACGTCTTTGTGGTTTTCATTTTCTTTACAAA
AGGAAGGCAGAGTCTACCCTGCAGTCAGGCAGAGATGAAG
GTCACTTGTCAGAGTCATGGTGGCTTT
 MMSSTVLSCGGCVLLTELLSTGPPPWRLMTRLCGFHFLYK
RKAESTLQSGRDEGHLSESWWL
 62 -

BLASTP Hit ID (ORF) Description Score Start End Frac Aligned Query Num Hsps Frac Identical Length  
No BLASTP result for Longest-ORF!

Public Clones  
Private Clones OST68763 (lexicon) OST85812 (lexicon) OST224455 (lexicon) OST143188 (lexicon)
OST63955 (lexicon) OST81543 (lexicon) OST303667 (lexicon) OST109293 (lexicon)
OST261277 (lexicon) OST374136 (lexicon) OST420664 (lexicon) OST214055 (lexicon)
OST457712 (lexicon) OST118881 (lexicon) OST32171 (lexicon) OST88275 (lexicon)