TrapCLuster Report for TCL4137

Internal ID 
4137
 
Accession 
TCL4137
 
Sequence 
gtgttgtgtcgctatttccttggaatcgaaacacttccttctgaaggggaactcactcataagactcaggatgctcagaa
agttaggactcaggaggccttgctccctggggttagataagttggaagaaatggctgagagatcagaaactcttccgtgg
agctgctgggaagttgagcaggaaactccagggatgaagccagCAGAGAGTGGCGAGGAATGCAAGGAGGTCCTGGTCCC
AAGACCTCAGCTTGCCTGGAGCCAGAAGCCAGGGACCTGAAGGGTTTTAACCACGTGTTCATCAGAACCGAATAAAGAGA
CCTGGGCTCCCACTAGTTACCTATCCTGAGTCCCATTCCCCAGCTTTTCCTTGAGGTCACCATTCTCTGGACCCTCTGAC
CTCAAAGTGccagagcgaccacaaaccactcccacgagaggacctggatgatggaccagaaagtaagaggaccagttctg
actacctgcctcaccagcctcggaaggggcgcagcttagagccaggggtcctagaggctccctggccagaaagccaaaat
ctctggttaggatcatcacagagtctcaagggaagggcctccctgcctgctgggccatctggaccctgatcctgtgtgtg
tgagcttgtgtatgagtatgcttctgtgtcttacaggccatgtgggtggctgggagctgtagagtcatgacccagccctc
ctagcaagcctctggctcccctgtggtcagtttcactctgacatctggtccagttcacagctggccagcttcctgcatgg
cagtttttcactttccctctctgagatctgggagcaaaggcctcctcaccccgttctttccccccacccacttcttgact
gcatacgagaagttgctagattctggtcaaaacttctagaaaa
 
RNA length 
923
 
Overlapping 
 
 
Blocks 
3
 
Traps 
41
 
Distance from gene 
60839
 
Gene in slice 
0
 
Gene in slice (same strand) 
0
 
Human Conservation 
1
 
Dog Conservation 
1
 
Gallus Conservation 
0
 
Total Conservation 
1
 
LORF Length 
92
 
LORF-Blastp Result 
0
 
UTRscan Result 
0
 
Max UTR length 
0
 
Closest Gene (stable_id) 
ENSMUSG00000057522
 
Closest Gene (name) 
Spop
 
Close to OMIM 
0
 
Disease 
0
 
Go To Ensembl 
Go To UCSC 

Internal Id  Chromosome  Start  End  Strand  Release 
1787
 
18
 
14112460
 
14112755
 
-1
 
NCBIM34
 

Longest ORF Translation Length Strand
tgttgtgtcgctatttccttggaatcgaaacacttccttc
tgaaggggaactcactcataagactcaggatgctcagaaa
gttaggactcaggaggccttgctccctggggttagataag
ttggaagaaatggctgagagatcagaaactcttccgtgga
gctgctgggaagttgagcaggaaactccagggatgaagcc
agCAGAGAGTGGCGAGGAATGCAAGGAGGTCCTGGTCCCA
AGACCTCAGCTTGCCTGGAGCCAGAAGCCAGGGACCT
CCVAISLESKHFLLKGNSLIRLRMLRKLGLRRPCSLGLDK
LEEMAERSETLPWSCWEVEQETPGMKPAESGEECKEVLVP
RPQLAWSQKPGT
92 +

BLASTP Hit ID (ORF) Description Score Start End Frac Aligned Query Num Hsps Frac Identical Length  
No BLASTP result for Longest-ORF!

Public Clones  
Private Clones OST252355 (lexicon) OST178068 (lexicon) OST43740 (lexicon) OST200541 (lexicon)
OST143618 (lexicon) OST24571 (lexicon) OST407665 (lexicon) OST442678 (lexicon)
OST103291 (lexicon) OST78281 (lexicon) OST79942 (lexicon) OST391570 (lexicon)
OST294914 (lexicon) OST315869 (lexicon) OST56397 (lexicon) OST136049 (lexicon)
OST345480 (lexicon) OST234955 (lexicon) OST290884 (lexicon) OST165422 (lexicon)
OST90833 (lexicon) OST230417 (lexicon) OST288334 (lexicon) OST173475 (lexicon)
OST241389 (lexicon) OST189523 (lexicon) OST126775 (lexicon) OST394019 (lexicon)
OST223365 (lexicon) OST311176 (lexicon) OST122979 (lexicon) OST17999 (lexicon)
OST466170 (lexicon) OST187290 (lexicon) OST300298 (lexicon) OST83706 (lexicon)
OST200051 (lexicon) OST270062 (lexicon) OST63856 (lexicon) OST117321 (lexicon)
OST326242 (lexicon)